CDS

Accession Number TCMCG007C58384
gbkey CDS
Protein Id XP_009117423.1
Location complement(join(40077572..40077670,40077773..40078026,40078119..40078342,40078429..40078559,40078649..40078770,40078873..40078905,40079015..40079039,40079212..40079289,40079371..40079373))
Gene LOC103842542
GeneID 103842542
Organism Brassica rapa

Protein

Length 322aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009119175.3
Definition ubiquitin recognition factor in ER-associated degradation protein 1 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description Ubiquitin fusion degradation protein
KEGG_TC -
KEGG_Module M00400        [VIEW IN KEGG]
M00403        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
KEGG_ko ko:K14016        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04141        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0001817        [VIEW IN EMBL-EBI]
GO:0001818        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002683        [VIEW IN EMBL-EBI]
GO:0002697        [VIEW IN EMBL-EBI]
GO:0002698        [VIEW IN EMBL-EBI]
GO:0002831        [VIEW IN EMBL-EBI]
GO:0002832        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005102        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031348        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032101        [VIEW IN EMBL-EBI]
GO:0032102        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032480        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034098        [VIEW IN EMBL-EBI]
GO:0036501        [VIEW IN EMBL-EBI]
GO:0039531        [VIEW IN EMBL-EBI]
GO:0039532        [VIEW IN EMBL-EBI]
GO:0039535        [VIEW IN EMBL-EBI]
GO:0039536        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0043901        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050687        [VIEW IN EMBL-EBI]
GO:0050688        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051117        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902532        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTTTTCGACGGATACCATTACCATGGAACCTCCTTTGAGCAGACTTACCGGTGCTATCCTGCATCTTTTATCGACAAGCCCCAAATTGAAAGTGGTGACAAGATTATAATGCCACCATCAGCACTTGACCGTCTCGCCTCTTTGCATATTGACTACCCCATGCTGTTTGAGCTTCGTAATGCTGGAATCGAACGTGTTTCACACTGTGGAGTCCTCGAGTTCATCGCTGAAGAAGGCATGATTTACATGCCATATTGGATGATGCAGAATCTGCTGCTGCAAGAAGGAGACATTGTGAAAGTCAGAAACGTCACTCTTCCAAAGGGAACCTATGTTAAGCTACAGCCGCACACCACGGACTTCCTGGATATATCTAATCCGAAAGCCATCTTGGAGACTGCTTTGAGGAATTACTCATGCCTAACCACTGGGGATAGCATTATGGTTCCATACAACAATAAGAAGTACTTTATAGATATAGTTGAAACAAAGCCTGCTAATGGAATCAGCATCATAGAGACAGACTGTGAGGTTGATTTTGCGCCTCCCCTTGATTACAAGGAGCCTGAACGTCCCAAAACAGCACCTGCTGCAGCTAAGGGTCCGGCTAAAGAGGAAGTTGTGCCTGAACCTGAACCAAAGTTCAACCCTTTCACTGGATCTGGAAGACGGTTAGATGGGAGACCTCTTTCGTATGAGCCGCCAGCTGCATCTGCTTCCTCCTCCTCTAGCTCAAAAGATAAACAGCCTGCTGTTGCTAATGGGAATGGACAGGCTTCTGTAGCGAGTAGTAGCTCTGCTCGACAGGCTCAAGGAAAGCTTGTGTTTGGGGGAAACGCAAACCGTGCTCCAAAAGAAGCTCCAAAGGTTGGAGCTGGAAAAGAGACGAAACCAGAGGAAGAGGAGAAGAAAGAAGAGCCTAAGTTCCAAGCTTTCACTGGGAAGAAGTATTCGTTGAGGGGTTGA
Protein:  
MFFDGYHYHGTSFEQTYRCYPASFIDKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVKVRNVTLPKGTYVKLQPHTTDFLDISNPKAILETALRNYSCLTTGDSIMVPYNNKKYFIDIVETKPANGISIIETDCEVDFAPPLDYKEPERPKTAPAAAKGPAKEEVVPEPEPKFNPFTGSGRRLDGRPLSYEPPAASASSSSSSKDKQPAVANGNGQASVASSSSARQAQGKLVFGGNANRAPKEAPKVGAGKETKPEEEEKKEEPKFQAFTGKKYSLRG